Package: rSEA 2.1.2

Mitra Ebrahimpoor

rSEA: Simultaneous Enrichment Analysis

SEA performs simultaneous feature-set testing for (gen)omics data. It tests the unified null hypothesis and controls the family-wise error rate for all possible pathways. The unified null hypothesis is defined as: "The proportion of true features in the set is less than or equal to a threshold." Family-wise error rate control is provided through use of closed testing with Simes test. There are some practical functions to play around with the pathways of interest.

Authors:Mitra Ebrahimpoor

rSEA_2.1.2.tar.gz
rSEA_2.1.2.zip(r-4.7)rSEA_2.1.2.zip(r-4.6)rSEA_2.1.2.zip(r-4.5)
rSEA_2.1.2.tgz(r-4.6-any)rSEA_2.1.2.tgz(r-4.5-any)
rSEA_2.1.2.tar.gz(r-4.7-any)rSEA_2.1.2.tar.gz(r-4.6-any)
rSEA_2.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
rSEA/json (API)

# Install 'rSEA' in R:
install.packages('rSEA', repos = c('https://mitra-ep.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mitra-ep/rsea/issues

On CRAN:

Conda:

3.70 score 10 scripts 631 downloads 5 exports 19 dependencies

Last updated from:e1da2d83d9. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE135
source / vignettesOK174
linux-release-x86_64NOTE121
macos-release-arm64NOTE93
macos-oldrel-arm64NOTE89
windows-develNOTE81
windows-releaseNOTE101
windows-oldrelNOTE76
wasm-releaseOK102

Exports:plotSEASEAsetTDPsetTesttopSEA

Dependencies:clicpp11farverggplot2gluegtablehommelisobandlabelinglifecycleR6RColorBrewerRcpprlangS7scalesvctrsviridisLitewithr

rSEA R package

Mitra Ebrahimpoor

Rendered fromrSEA_vignette.Rmdusingknitr::rmarkdownon May 22 2026.

Last update: 2021-10-17
Started: 2019-10-07